Noodle Biomedical Literature Discovery MCP

Overview

Noodle Biomedical Literature Discovery MCP is a remote MCP server that brings biomedical research directly into your AI workflow. Search PubMed and other biomedical databases, inspect publication records, and traverse citation or semantic graphs to discover connections across the literature. Any MCP-compatible AI assistant can call Noodle's tools to explore research papers and build knowledge graphs in real time.

The server runs as a hosted endpoint at https://api.helena.bio/noodle/v1/mcp with no local installation required—just point your client and connect. Version v0.2.1 is published under the Apache-2.0 license with full source code available at helena-bioinformatics/noodle-mcp on GitHub. No authentication credentials are needed.

Noodle Biomedical Literature Discovery MCP is categorized as AI & Agents on mcp.site and integrates with any MCP client including Claude Desktop, Claude Code, Cursor, VS Code, Windsurf, and Zed. If you maintain this project for helena-bioinformatics, claim this listing to verify ownership and keep information current.

Installation

Settings → Connectors → Add custom connector
Name: Noodle Biomedical Literature Discovery MCP
URL:  https://api.helena.bio/noodle/v1/mcp